The results were subjected to one-way ANOVA, followed by Fisher’s Protected Least Significant Difference (PLSD) using Selleck C646 SPSS version 17. Differences were considered to be statistically significant at p<0.05 and all data represent the mean±standard deviation. The full-length NKEF sequence was isolated from a rock bream liver cDNA library [22] and named RbNKEF. The RbNKEF cDNA was 1062 bp long and contained an open reading frame (ORF) of 594 bp that encoded

198 amino acid residues. The 5′ UTR (42 bp) and 3′ UTR (423 bp) contained a polyadenylation signal (AATAAA), a polyadenylation site, and two ‘ATTTA’ sequences (Fig. 1), which have been implicated in shortening the half-life of several cytokines and growth factors [15]. The predicted 198 amino acid RbNKEF polypeptide has a calculated molecular weight of 22.0 kDa, and theoretical isoelectric point (pI) of 6.3. The nucleotide sequence data reported in this paper have been deposited in the DDBJ/EMBL/GenBank nucleotide sequence databases, with the accession number AB603654. The amino acid sequence analysis indicated the existence of two consensus Val–Cys–Pro (VCP) motifs (amino acids 51–53 and 172–174) and three consensus cysteine residues (Cys-52, Cys-71, and Cys-173). Among the three cysteine residues, Cys-52 and Cys-173 are involved in the

VCP motifs, and Cys-71 is at the N-terminus (Fig. 2). The phylogenetic analysis indicated that the NKEF sequences from marine fish and freshwater fish were segregated into two separate clusters. The rock bream NKEF clustered with the marine fish group and showed selleck kinase inhibitor the closest relationship to the black rockfish NKEF-A. This grouping was well supported by bootstrapping (Fig. 3). The expression of the NKEF gene in eight tissues from healthy rock bream

was detected via real-time RT-PCR. The gene was predominantly expressed in the gill, liver, and intestine. It was weakly expressed in the head kidney, trunk kidney, muscle, and PBLs (Fig. 4). Additionally, the mRNA expression of the rock bream NKEF in the head kidney was examined under viral and bacterial challenge via real-time RT-PCR analysis. Symptoms of the disease were first apparent on approximately selleck products Day 4 post-injection, and each pathogen was reconfirmed via PCR (RSIV) or cell culture (bacteria) methods. The experimental challenge of rock bream with E. tarda, S. iniae, and RSIV resulted in significant increases in NKEF mRNA in the head kidney ( Fig. 5). In E. tarda-injected rock bream, the NKEF transcripts peaked 6 h post-injection. In S. iniae-injected fish, the NKEF transcripts were induced after 3 h, increased after 6 h, and peaked 24 h post-injection. NKEF mRNA increased significantly 24 h post-injection with S. iniae. In the RSIV-injected fish, the NKEF transcripts were induced after 1 h (early than the other pathogens) and maintained for 6 h, peaked at 12 h, and decreased 48 h post-injection ( Fig. 5). To obtain rNKEF, RbNKEF was expressed in E.